STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO02539.1Oxidoreductase. (325 aa)    
Predicted Functional Partners:
KRO02067.1
PTS system, fructose specific IIABC component.
     
 0.888
KRO01643.1
PTS family porter fructose-specific component IIB.
     
 0.888
KRN98059.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.868
KRO00131.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.802
KRN98057.1
glutaryl-CoA dehydrogenase.
  
 0.541
KRO01034.1
Hypothetical protein.
  
  0.511
KRO02540.1
Hypothetical protein.
       0.506
KRO02541.1
Hypothetical protein.
       0.506
KRO02542.1
LtrC.
       0.506
KRN96259.1
Enoyl-(acyl carrier protein) reductase.
  
  
  0.485
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.