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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO01029.1Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (408 aa)    
Predicted Functional Partners:
KRO01030.1
Hypothetical protein.
 
 0.999
KRO01027.1
ABC transporter.
  
 0.998
KRO01031.1
ABC transporter-associated protein.
 
 0.997
KRO01028.1
SufD protein.
 
 0.993
KRN97427.1
Thioredoxin reductase.
  
 
 0.924
KRO01307.1
Transcriptional regulator, AraC family.
    
  0.865
KRN98038.1
Cystathionine beta-lyase.
    
 0.757
KRN98039.1
Cystathionine gamma-synthase.
    
 0.757
KRN98072.1
Cystathionine beta-lyase.
    
 0.757
KRO01076.1
Cysteine desulfurase selenocysteine lyase.
    
0.750
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.