Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KRO01098.1ComE operon protein 1. (251 aa)    
Predicted Functional Partners:
KRO01100.1
Competence protein ComEC.
 
  
 0.907
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
      0.882
KRO01099.1
dCMP deaminase.
  
  
 0.862
KRN97372.1
ComG operon protein 1.
  
  
 0.861
KRN97441.1
ComF operon protein 1.
   
  
 0.856
KRO01097.1
ATP-dependent protease La.
      0.835
KRN97370.1
Hypothetical protein.
   
  
 0.832
KRN97371.1
ComG operon protein 2.
  
  
 0.828
KRN98132.1
Type IV prepilin leader peptidase.
  
  
 0.768
KRO01094.1
Hypothetical protein.
       0.688
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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