close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO00663.1MarR family transcriptional regulator. (153 aa)    
Predicted Functional Partners:
KRN95941.1
Trehalose PTS II ABC.
   
 
 0.814
KRN95942.1
PTS system beta-glucoside-specific EIIBCA component.
   
 
 0.814
KRN99812.1
Sugar-specific permease.
   
 
 0.814
KRN99535.1
PTS system sucrose-specific transporter subunit IIABC.
   
 
 0.814
KRN98443.1
Beta-glucosides PTS, EIIBCA.
   
 
 0.814
KRO00662.1
Glyoxalase.
    
 0.682
KRO02052.1
Organic hydroperoxide resistance protein.
 
  
 0.642
KRO00664.1
Hypothetical protein.
  
    0.617
KRO02042.1
Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family.
  
  
 0.474
KRN98057.1
glutaryl-CoA dehydrogenase.
  
 
 0.405
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.