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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsDD-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (131 aa)    
Predicted Functional Partners:
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
 0.981
rbsK-2
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. Belongs to the carbohydrate kinase PfkB family. Ribokinase subfamily.
 
  
 0.821
KRN98015.1
PTS system lactose-specific transporter subunit IIBC.
  
  
 0.775
KRO00668.1
Ribose transport protein RbsU.
 
  
 0.692
KRO00671.1
Ribose operon repressor.
  
  
 0.593
KRO01293.1
Hypothetical protein.
  
  
 0.583
KRO01678.1
2-dehydro-3-deoxygluconokinase.
  
  
 0.583
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.