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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN99526.1Glycoside hydrolase family 25. (320 aa)    
Predicted Functional Partners:
KRO02701.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.835
KRN99523.1
Hypothetical protein.
       0.773
KRN99524.1
Hypothetical protein.
       0.773
KRN99525.1
Hypothetical protein.
       0.773
KRN98069.1
Hypothetical protein.
 
   
 0.691
KRN99517.1
Hypothetical protein.
    
 0.618
KRO02024.1
Surface antigen.
  
   
 0.593
KRN99515.1
Phage related protein minor tail protein.
  
    0.592
KRN99521.1
Hypothetical protein.
       0.576
KRN99522.1
Hypothetical protein.
       0.558
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.