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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN99150.1Cro CI family transcriptional regulator. (127 aa)    
Predicted Functional Partners:
KRO01080.1
Hypothetical protein.
  
  
 0.822
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
    
 0.790
KRO02558.1
Hypothetical protein.
  
 
 0.790
KRO02772.1
Transcriptional regulator.
  
 
 0.788
KRO01120.1
Hypothetical protein.
  
     0.769
KRO01119.1
Hypothetical protein.
  
     0.768
KRN98803.1
Hypothetical protein.
  
     0.752
KRO02794.1
Hypothetical protein.
  
     0.721
KRN98817.1
Glycosyltransferase.
  
   
 0.715
KRN98392.1
IpaB EvcA family protein.
  
     0.685
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.