Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRN99151.1Capsular polysaccharide biosynthesis protein. (258 aa)    
Predicted Functional Partners:
KRO01318.1
Tyrosine-protein kinase.
  
 0.991
KRO01319.1
Exopolysaccharide chain length regulator.
 
 
 0.974
KRO01325.1
Lipopolysaccharide synthesis sugar transferase.
 
  
 0.790
KRN99150.1
Cro CI family transcriptional regulator.
   
   0.637
KRO02629.1
Non-specific serine threonine protein kinase.
    
 
 0.485
KRN99149.1
TerC faamily membrane protein.
       0.458
KRN99152.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.437
KRO01326.1
Udp-glucose 4-epimerase.
 
  
 0.417
KRN99189.1
Sugar biosynthesis protein.
     
 0.416
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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