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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN99189.1Sugar biosynthesis protein. (415 aa)    
Predicted Functional Partners:
KRO01326.1
Udp-glucose 4-epimerase.
 0.972
KRN99555.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.923
KRO02067.1
PTS system, fructose specific IIABC component.
     
 0.911
KRO01643.1
PTS family porter fructose-specific component IIB.
     
 0.911
KRO01346.1
Hypothetical protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.888
KRN99186.1
UTP--glucose-1-phosphate uridylyltransferase.
  
 0.877
KRN99187.1
Hypothetical protein.
  
 0.877
KRO01320.1
MOP superfamily multidrug oligosaccharidyl-lipid polysaccharide flippase transporter.
 
  
 0.859
KRO00641.1
UTP--glucose-1-phosphate uridylyltransferase.
  
 0.824
KRN99178.1
UTP--glucose-1-phosphate uridylyltransferase.
  
 0.824
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.