STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN98993.1Hypothetical protein. (105 aa)    
Predicted Functional Partners:
KRN98992.1
Galactitol pts, eiia.
 
 
 0.994
KRN98994.1
pts36C protein.
 
 
 0.989
KRN98633.1
PTS system, IIC component.
 
 
 0.911
KRN98631.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, galactitol specific.
 
 
 0.910
KRN98995.1
Hypothetical protein.
 
  
 0.908
KRN98799.1
Phosphocarrier protein HPr.
    
  0.880
KRO02067.1
PTS system, fructose specific IIABC component.
  
 
 0.668
KRO01643.1
PTS family porter fructose-specific component IIB.
  
 
 0.668
KRN98029.1
L-iditol 2-dehydrogenase.
  
 
 0.496
KRN98030.1
L-iditol 2-dehydrogenase.
  
 
 0.496
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.