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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN98502.1HAD superfamily hydrolase. (262 aa)    
Predicted Functional Partners:
KRO02663.1
Riboflavin kinase FMN adenylyltransferase; Belongs to the ribF family.
    
 0.902
KRO02691.1
NADPH-flavin oxidoreductase; Belongs to the flavin oxidoreductase frp family.
    
  0.898
KRN98445.1
HAD superfamily hydrolase.
 
     0.776
KRO02814.1
Hydrolase, HAD superfamily protein.
 
 
 
0.571
KRO02051.1
HAD superfamily hydrolase.
 
 
0.515
KRN95902.1
PTS system fructose IIA component.
    
 0.439
KRN95959.1
PTS system, mannose-specific IIAB component.
    
 0.439
KRN95833.1
Fumarate reductase, flavoprotein subunit precursor.
    
  0.416
aroD
Fumarate reductase flavoprotein subunit; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.
    
  0.416
KRN98991.1
Flavin reductase.
    
  0.416
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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