STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN98631.1Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, galactitol specific. (167 aa)    
Predicted Functional Partners:
KRN98632.1
PTS system galacitol-specific transporter subunit IIB.
 
 
 0.995
KRN98633.1
PTS system, IIC component.
 
 
 0.986
KRN98994.1
pts36C protein.
 
 
 0.969
KRN98799.1
Phosphocarrier protein HPr.
  
 
 0.925
KRN98993.1
Hypothetical protein.
 
 
 0.910
KRN98992.1
Galactitol pts, eiia.
  
  
 
0.889
KRO01643.1
PTS family porter fructose-specific component IIB.
 
 
 0.884
KRO02067.1
PTS system, fructose specific IIABC component.
  
 
 0.867
KRN95902.1
PTS system fructose IIA component.
  
 
 0.650
KRN95959.1
PTS system, mannose-specific IIAB component.
  
 
 0.650
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.