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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO01645.1RpiR family phosphosugar-binding transcriptional regulator. (248 aa)    
Predicted Functional Partners:
KRN95941.1
Trehalose PTS II ABC.
  
 
 0.869
KRN95942.1
PTS system beta-glucoside-specific EIIBCA component.
  
 
 0.869
KRN99812.1
Sugar-specific permease.
  
 
 0.869
KRN99535.1
PTS system sucrose-specific transporter subunit IIABC.
  
 
 0.869
KRN98443.1
Beta-glucosides PTS, EIIBCA.
  
 
 0.869
KRO01643.1
PTS family porter fructose-specific component IIB.
 
   
 0.799
KRO01644.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
   
 0.655
KRN99533.1
Transcriptional regulator.
  
     0.634
KRN98633.1
PTS system, IIC component.
  
     0.622
KRN98632.1
PTS system galacitol-specific transporter subunit IIB.
 
     0.556
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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