Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A9D14_01970 | A9D14_02055 | GCA_001661675_00391 | GCA_001661675_00410 | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Unannotated protein. | 0.720 |
A9D14_01970 | A9D14_03875 | GCA_001661675_00391 | GCA_001661675_00777 | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Unannotated protein. | 0.591 |
A9D14_01970 | A9D14_10870 | GCA_001661675_00391 | GCA_001661675_02187 | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Unannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.583 |
A9D14_01970 | A9D14_16120 | GCA_001661675_00391 | GCA_001661675_03240 | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Unannotated protein. | 0.589 |
A9D14_01970 | fusA | GCA_001661675_00391 | GCA_001661675_00810 | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Unannotated protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.627 |
A9D14_01970 | rplO | GCA_001661675_00391 | GCA_001661675_00832 | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.576 |
A9D14_01970 | rplU | GCA_001661675_00391 | GCA_001661675_01800 | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.585 |
A9D14_01970 | rpsQ | GCA_001661675_00391 | GCA_001661675_00822 | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Unannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.583 |
A9D14_02055 | A9D14_01970 | GCA_001661675_00410 | GCA_001661675_00391 | Unannotated protein. | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.720 |
A9D14_02055 | A9D14_03875 | GCA_001661675_00410 | GCA_001661675_00777 | Unannotated protein. | Unannotated protein. | 0.591 |
A9D14_02055 | A9D14_06105 | GCA_001661675_00410 | GCA_001661675_01224 | Unannotated protein. | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.719 |
A9D14_02055 | A9D14_10870 | GCA_001661675_00410 | GCA_001661675_02187 | Unannotated protein. | Unannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.583 |
A9D14_02055 | A9D14_16120 | GCA_001661675_00410 | GCA_001661675_03240 | Unannotated protein. | Unannotated protein. | 0.589 |
A9D14_02055 | GCA_001661675_02084 | GCA_001661675_00410 | GCA_001661675_02084 | Unannotated protein. | Unannotated protein. | 0.720 |
A9D14_02055 | fusA | GCA_001661675_00410 | GCA_001661675_00810 | Unannotated protein. | Unannotated protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.627 |
A9D14_02055 | rplO | GCA_001661675_00410 | GCA_001661675_00832 | Unannotated protein. | Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.576 |
A9D14_02055 | rplU | GCA_001661675_00410 | GCA_001661675_01800 | Unannotated protein. | Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.585 |
A9D14_02055 | rpsQ | GCA_001661675_00410 | GCA_001661675_00822 | Unannotated protein. | Unannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.583 |
A9D14_03875 | A9D14_01970 | GCA_001661675_00777 | GCA_001661675_00391 | Unannotated protein. | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.591 |
A9D14_03875 | A9D14_02055 | GCA_001661675_00777 | GCA_001661675_00410 | Unannotated protein. | Unannotated protein. | 0.591 |
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