Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A9D14_05525 | aroA | GCA_001661675_01105 | GCA_001661675_01109 | Unannotated protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.439 |
A9D14_05525 | cmk | GCA_001661675_01105 | GCA_001661675_01107 | Unannotated protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Unannotated protein. | 0.944 |
A9D14_05525 | ndk | GCA_001661675_01105 | GCA_001661675_02239 | Unannotated protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Unannotated protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.486 |
A9D14_06505 | A9D14_12060 | GCA_001661675_01304 | GCA_001661675_02423 | Unannotated protein. | Unannotated protein; Belongs to the 5'-nucleotidase family. | 0.904 |
A9D14_06505 | cmk | GCA_001661675_01304 | GCA_001661675_01107 | Unannotated protein. | Unannotated protein. | 0.902 |
A9D14_06505 | ndk | GCA_001661675_01304 | GCA_001661675_02239 | Unannotated protein. | Unannotated protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.900 |
A9D14_06505 | surE | GCA_001661675_01304 | GCA_001661675_00273 | Unannotated protein. | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.904 |
A9D14_09910 | A9D14_10075 | GCA_001661675_01997 | GCA_001661675_02030 | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.999 |
A9D14_09910 | cmk | GCA_001661675_01997 | GCA_001661675_01107 | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Unannotated protein. | 0.929 |
A9D14_09910 | ndk | GCA_001661675_01997 | GCA_001661675_02239 | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Unannotated protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.917 |
A9D14_10075 | A9D14_09910 | GCA_001661675_02030 | GCA_001661675_01997 | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.999 |
A9D14_10075 | cmk | GCA_001661675_02030 | GCA_001661675_01107 | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Unannotated protein. | 0.925 |
A9D14_10075 | ndk | GCA_001661675_02030 | GCA_001661675_02239 | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Unannotated protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.920 |
A9D14_12060 | A9D14_06505 | GCA_001661675_02423 | GCA_001661675_01304 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein. | 0.904 |
A9D14_12060 | cmk | GCA_001661675_02423 | GCA_001661675_01107 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein. | 0.900 |
A9D14_12060 | surE | GCA_001661675_02423 | GCA_001661675_00273 | Unannotated protein; Belongs to the 5'-nucleotidase family. | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.917 |
aroA | A9D14_05525 | GCA_001661675_01109 | GCA_001661675_01105 | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Unannotated protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.439 |
aroA | cmk | GCA_001661675_01109 | GCA_001661675_01107 | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Unannotated protein. | 0.982 |
cmk | A9D14_05525 | GCA_001661675_01107 | GCA_001661675_01105 | Unannotated protein. | Unannotated protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.944 |
cmk | A9D14_06505 | GCA_001661675_01107 | GCA_001661675_01304 | Unannotated protein. | Unannotated protein. | 0.902 |
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