Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A9D14_10435 | A9D14_10450 | GCA_001661675_02103 | GCA_001661675_02106 | Unannotated protein. | Unannotated protein. | 0.779 |
A9D14_10435 | A9D14_10460 | GCA_001661675_02103 | GCA_001661675_02108 | Unannotated protein. | Unannotated protein; Belongs to the MraZ family. | 0.828 |
A9D14_10435 | GCA_001661675_02105 | GCA_001661675_02103 | GCA_001661675_02105 | Unannotated protein. | Unannotated protein. | 0.849 |
A9D14_10435 | ftsA | GCA_001661675_02103 | GCA_001661675_02095 | Unannotated protein. | Unannotated protein; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.702 |
A9D14_10435 | ftsQ | GCA_001661675_02103 | GCA_001661675_02096 | Unannotated protein. | Unannotated protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.836 |
A9D14_10435 | murB | GCA_001661675_02103 | GCA_001661675_02097 | Unannotated protein. | Unannotated protein; Cell wall formation. | 0.669 |
A9D14_10435 | murD | GCA_001661675_02103 | GCA_001661675_02101 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.926 |
A9D14_10435 | murE | GCA_001661675_02103 | GCA_001661675_02104 | Unannotated protein. | Unannotated protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.943 |
A9D14_10435 | murG | GCA_001661675_02103 | GCA_001661675_02099 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.892 |
A9D14_10435 | rsmH | GCA_001661675_02103 | GCA_001661675_02107 | Unannotated protein. | Unannotated protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.834 |
A9D14_10450 | A9D14_10435 | GCA_001661675_02106 | GCA_001661675_02103 | Unannotated protein. | Unannotated protein. | 0.779 |
A9D14_10450 | A9D14_10460 | GCA_001661675_02106 | GCA_001661675_02108 | Unannotated protein. | Unannotated protein; Belongs to the MraZ family. | 0.794 |
A9D14_10450 | GCA_001661675_02105 | GCA_001661675_02106 | GCA_001661675_02105 | Unannotated protein. | Unannotated protein. | 0.794 |
A9D14_10450 | ftsA | GCA_001661675_02106 | GCA_001661675_02095 | Unannotated protein. | Unannotated protein; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.527 |
A9D14_10450 | ftsQ | GCA_001661675_02106 | GCA_001661675_02096 | Unannotated protein. | Unannotated protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.527 |
A9D14_10450 | murB | GCA_001661675_02106 | GCA_001661675_02097 | Unannotated protein. | Unannotated protein; Cell wall formation. | 0.527 |
A9D14_10450 | murD | GCA_001661675_02106 | GCA_001661675_02101 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.527 |
A9D14_10450 | murE | GCA_001661675_02106 | GCA_001661675_02104 | Unannotated protein. | Unannotated protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.794 |
A9D14_10450 | murG | GCA_001661675_02106 | GCA_001661675_02099 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.527 |
A9D14_10450 | rsmH | GCA_001661675_02106 | GCA_001661675_02107 | Unannotated protein. | Unannotated protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.794 |
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