STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9D14_15605Unannotated protein. (825 aa)    
Predicted Functional Partners:
A9D14_00460
Unannotated protein.
  
 
 0.818
A9D14_06320
Unannotated protein.
  
 
 0.818
A9D14_12340
Unannotated protein.
  
  
 0.693
A9D14_02870
Unannotated protein.
 
    0.572
A9D14_03195
Unannotated protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
   
 
 0.531
GCA_001661675_03794
Unannotated protein.
  
     0.496
pal
Unannotated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.484
A9D14_00465
Unannotated protein.
 
 
 0.450
A9D14_15600
Unannotated protein.
       0.431
A9D14_07275
Unannotated protein.
  
 
 0.424
Your Current Organism:
Croceicoccus marinus
NCBI taxonomy Id: 450378
Other names: CGMCC 1.6776, Croceicoccus marinus Xu et al. 2009 emend. Huang et al. 2015, JCM 14846, Sphingomonadaceae bacterium E4A9, strain E4A9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.