STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9D14_18595Unannotated protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1070 aa)    
Predicted Functional Partners:
A9D14_18605
Unannotated protein.
 
  
 0.991
A9D14_18620
Unannotated protein.
 
 
 0.970
A9D14_11450
Unannotated protein.
  
 
 0.864
A9D14_11485
Unannotated protein.
  
 
 0.864
A9D14_18155
Unannotated protein.
  
 
 0.864
GCA_001661675_03738
Unannotated protein.
  
  
 0.850
A9D14_01505
Unannotated protein.
  
 
 0.818
A9D14_18390
Unannotated protein.
 
    0.789
A9D14_18600
Unannotated protein.
       0.773
A9D14_07810
Unannotated protein.
  
  
 0.771
Your Current Organism:
Croceicoccus marinus
NCBI taxonomy Id: 450378
Other names: CGMCC 1.6776, Croceicoccus marinus Xu et al. 2009 emend. Huang et al. 2015, JCM 14846, Sphingomonadaceae bacterium E4A9, strain E4A9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.