STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000763375_01521Unannotated protein. (135 aa)    
Predicted Functional Partners:
GCA_000763375_01520
Unannotated protein.
 
 
 0.951
GCA_000763375_01519
Unannotated protein.
 
 
 0.947
GCA_000763375_01518
Unannotated protein.
 
 
 0.889
GCA_000763375_00499
Unannotated protein.
  
  
  0.772
GCA_000763375_01727
Unannotated protein.
 
  
  0.768
GCA_000763375_01517
Unannotated protein.
     
 0.764
GCA_000763375_03204
Unannotated protein.
  
  
  0.758
GCA_000763375_01950
Unannotated protein.
    
  0.743
GCA_000763375_02353
Unannotated protein.
    
  0.717
GCA_000763375_01755
Unannotated protein.
  
     0.653
Your Current Organism:
Microbacterium profundi
NCBI taxonomy Id: 450380
Other names: CGMCC 1.6777, JCM 14840, M. profundi, Microbacterium profundi Wu et al. 2008, Microbacterium sp. Shh49, strain Shh49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.