Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
arnBAminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family. (372 aa)    
Predicted Functional Partners:
capD_2
Putative nucleoside-diphosphate sugar epimerase.
 
  
 0.873
iolG
Oxidoreductase.
 
  
 0.767
Lade_0742
Oxidoreductase.
 
  
 0.763
dhbF
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.671
capL
Protein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.658
Lade_0731
Chain length determinant protein.
  
  
 0.638
Lade_0739
Chloramphenicol acetyltransferase.
 
  
 0.635
capD_1
NAD dependent epimerase/dehydratase.
  
  
 0.627
Lade_0730
Hypothetical protein.
       0.598
Lade_0737
Polysaccharide biosynthesis protein.
 
    0.562
Your Current Organism:
Legionella adelaidensis
NCBI taxonomy Id: 45056
Other names: ATCC 49625, CCUG 31231 A, CIP 103645, DSM 19888, L. adelaidensis, NCTC 12735
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