STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhLeucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (357 aa)    
Predicted Functional Partners:
pdhB_1
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
 
 
 0.951
Lade_1213
Glutamate synthase; Belongs to the glutamate synthase family.
 
 0.927
putA
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.821
lly
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.820
Lade_0807
SAM-dependent O-methyltransferase.
       0.790
fadH
2,4-dienoyl-CoA reductase FadH1.
  
 0.780
pksJ
Polyketide synthase module.
    
 0.779
pta
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
  
 0.777
sspA_1
Glutathione S-transferase (maleylacetoacetate isomerase).
 
     0.737
Lade_0809
Fumarylacetoacetate hydrolase.
  
  
 0.709
Your Current Organism:
Legionella adelaidensis
NCBI taxonomy Id: 45056
Other names: ATCC 49625, CCUG 31231 A, CIP 103645, DSM 19888, L. adelaidensis, NCTC 12735
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