Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
capLProtein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (410 aa)    
Predicted Functional Partners:
galE_4
UDP-glucuronate 5'-epimerase.
 
 
 0.948
capD_1
NAD dependent epimerase/dehydratase.
  
 
 0.923
wecB
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.892
rfbE
NAD-dependent epimerase/dehydratase.
 
  
 0.887
neuC
N-acylglucosamine 2-epimerase.
  
  
 0.846
galE_1
NAD dependent epimerase/dehydratase family protein.
 
    0.844
pgaC
Glycosyl transferase family protein.
       0.789
Lade_0968
HEAT repeat protein.
       0.774
Lade_0969
TRP containing protein.
       0.773
Lade_0972
Hypothetical protein.
       0.773
Your Current Organism:
Legionella adelaidensis
NCBI taxonomy Id: 45056
Other names: ATCC 49625, CCUG 31231 A, CIP 103645, DSM 19888, L. adelaidensis, NCTC 12735
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