Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lade_1125 | Lade_1129 | Lade_1125 | Lade_1129 | FeoC like transcriptional regulator. | Alpha/beta superfamily transporter hydrolase. | 0.536 |
Lade_1125 | feoA | Lade_1125 | Lade_1127 | FeoC like transcriptional regulator. | Ferrous iron transporter A. | 0.793 |
Lade_1125 | feoB | Lade_1125 | Lade_1126 | FeoC like transcriptional regulator. | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.840 |
Lade_1125 | yhcM | Lade_1125 | Lade_1128 | FeoC like transcriptional regulator. | ATPase N2B (nucleotide (GTP) binding protein). | 0.536 |
Lade_1129 | Lade_1125 | Lade_1129 | Lade_1125 | Alpha/beta superfamily transporter hydrolase. | FeoC like transcriptional regulator. | 0.536 |
Lade_1129 | Lade_1132 | Lade_1129 | Lade_1132 | Alpha/beta superfamily transporter hydrolase. | GNAT family acetyltransferase. | 0.428 |
Lade_1129 | feoA | Lade_1129 | Lade_1127 | Alpha/beta superfamily transporter hydrolase. | Ferrous iron transporter A. | 0.536 |
Lade_1129 | feoB | Lade_1129 | Lade_1126 | Alpha/beta superfamily transporter hydrolase. | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.536 |
Lade_1129 | panB | Lade_1129 | Lade_1130 | Alpha/beta superfamily transporter hydrolase. | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.532 |
Lade_1129 | panC | Lade_1129 | Lade_1131 | Alpha/beta superfamily transporter hydrolase. | Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.526 |
Lade_1129 | yhcM | Lade_1129 | Lade_1128 | Alpha/beta superfamily transporter hydrolase. | ATPase N2B (nucleotide (GTP) binding protein). | 0.790 |
Lade_1132 | Lade_1129 | Lade_1132 | Lade_1129 | GNAT family acetyltransferase. | Alpha/beta superfamily transporter hydrolase. | 0.428 |
Lade_1132 | panB | Lade_1132 | Lade_1130 | GNAT family acetyltransferase. | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.658 |
Lade_1132 | panC | Lade_1132 | Lade_1131 | GNAT family acetyltransferase. | Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.668 |
Lade_1132 | yhcM | Lade_1132 | Lade_1128 | GNAT family acetyltransferase. | ATPase N2B (nucleotide (GTP) binding protein). | 0.428 |
feoA | Lade_1125 | Lade_1127 | Lade_1125 | Ferrous iron transporter A. | FeoC like transcriptional regulator. | 0.793 |
feoA | Lade_1129 | Lade_1127 | Lade_1129 | Ferrous iron transporter A. | Alpha/beta superfamily transporter hydrolase. | 0.536 |
feoA | feoB | Lade_1127 | Lade_1126 | Ferrous iron transporter A. | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.995 |
feoA | yhcM | Lade_1127 | Lade_1128 | Ferrous iron transporter A. | ATPase N2B (nucleotide (GTP) binding protein). | 0.536 |
feoB | Lade_1125 | Lade_1126 | Lade_1125 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | FeoC like transcriptional regulator. | 0.840 |
page 1 of 3