STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bdhA3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)    
Predicted Functional Partners:
adc
Acetoacetate decarboxylase.
 
  
  0.958
dhbF
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.872
Lade_1664
Alpha-beta hydrolase family transporter esterase.
 
  
  0.863
hcr
Oxidoreductase, FAD-binding protein.
   
 0.840
pksJ
Polyketide synthase module.
  
 0.823
Lade_0807
SAM-dependent O-methyltransferase.
 
  
   0.822
pta
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.773
pdhB_1
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
   
 0.722
fadH
2,4-dienoyl-CoA reductase FadH1.
    
 0.712
rfbA
Phosphomannose isomerase GDP mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.681
Your Current Organism:
Legionella adelaidensis
NCBI taxonomy Id: 45056
Other names: ATCC 49625, CCUG 31231 A, CIP 103645, DSM 19888, L. adelaidensis, NCTC 12735
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