Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lade_0326 | Lade_0930 | Lade_0326 | Lade_0930 | Thaumatin domain-containing protein. | AAA domain (dynein-related subfamily). | 0.766 |
Lade_0326 | Lade_1019 | Lade_0326 | Lade_1019 | Thaumatin domain-containing protein. | Hypothetical protein. | 0.699 |
Lade_0326 | Lade_1026 | Lade_0326 | Lade_1026 | Thaumatin domain-containing protein. | Membrane protein. | 0.711 |
Lade_0326 | Lade_1144 | Lade_0326 | Lade_1144 | Thaumatin domain-containing protein. | Two component response regulator. | 0.717 |
Lade_0326 | Lade_1722 | Lade_0326 | Lade_1722 | Thaumatin domain-containing protein. | Putative asmA protein. | 0.757 |
Lade_0326 | Lade_1762 | Lade_0326 | Lade_1762 | Thaumatin domain-containing protein. | Hypothetical protein. | 0.801 |
Lade_0326 | Lade_1782 | Lade_0326 | Lade_1782 | Thaumatin domain-containing protein. | Hypothetical protein. | 0.745 |
Lade_0326 | wzzB | Lade_0326 | Lade_0749 | Thaumatin domain-containing protein. | Chain length determinant protein. | 0.757 |
Lade_0326 | zapD | Lade_0326 | Lade_0314 | Thaumatin domain-containing protein. | Cell division protein ZapD; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | 0.490 |
Lade_0930 | Lade_0326 | Lade_0930 | Lade_0326 | AAA domain (dynein-related subfamily). | Thaumatin domain-containing protein. | 0.766 |
Lade_0930 | Lade_1019 | Lade_0930 | Lade_1019 | AAA domain (dynein-related subfamily). | Hypothetical protein. | 0.501 |
Lade_0930 | Lade_1026 | Lade_0930 | Lade_1026 | AAA domain (dynein-related subfamily). | Membrane protein. | 0.560 |
Lade_0930 | Lade_1144 | Lade_0930 | Lade_1144 | AAA domain (dynein-related subfamily). | Two component response regulator. | 0.636 |
Lade_0930 | Lade_1722 | Lade_0930 | Lade_1722 | AAA domain (dynein-related subfamily). | Putative asmA protein. | 0.698 |
Lade_0930 | Lade_1762 | Lade_0930 | Lade_1762 | AAA domain (dynein-related subfamily). | Hypothetical protein. | 0.791 |
Lade_0930 | Lade_1782 | Lade_0930 | Lade_1782 | AAA domain (dynein-related subfamily). | Hypothetical protein. | 0.689 |
Lade_0930 | wzzB | Lade_0930 | Lade_0749 | AAA domain (dynein-related subfamily). | Chain length determinant protein. | 0.699 |
Lade_1019 | Lade_0326 | Lade_1019 | Lade_0326 | Hypothetical protein. | Thaumatin domain-containing protein. | 0.699 |
Lade_1019 | Lade_0930 | Lade_1019 | Lade_0930 | Hypothetical protein. | AAA domain (dynein-related subfamily). | 0.501 |
Lade_1019 | Lade_1026 | Lade_1019 | Lade_1026 | Hypothetical protein. | Membrane protein. | 0.946 |
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