STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lade_1990Phosphoesterase. (272 aa)    
Predicted Functional Partners:
Lade_1991
Hypothetical protein.
 
     0.852
Lade_1992
Hypothetical protein.
 
     0.848
aph
Spectinomycin phosphotransferase.
 
     0.793
Lade_0930
AAA domain (dynein-related subfamily).
 
     0.780
Lade_1762
Hypothetical protein.
  
     0.688
Lade_1547
Bacterial regulatory protein, luxR family.
  
     0.670
Lade_1981
FRG domain protein.
  
     0.664
Lade_1987
ATPase.
       0.664
Lade_1988
Hypothetical protein.
       0.664
grpB_2
Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
       0.664
Your Current Organism:
Legionella adelaidensis
NCBI taxonomy Id: 45056
Other names: ATCC 49625, CCUG 31231 A, CIP 103645, DSM 19888, L. adelaidensis, NCTC 12735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.