STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lade_2008Transmembrane protein. (285 aa)    
Predicted Functional Partners:
Lade_2067
Cysteine protease.
  
     0.572
Lade_2007
AraC family transcriptional regulator.
     
 0.555
Lade_1165
Zip family transporter.
  
   0.469
dotG_1
IcmE/DotG protein.
 
    0.459
Lade_2009
Hypothetical protein.
       0.448
Lade_2180
Protein-tyrosine phosphatase.
  
     0.428
Lade_1727
Acid sphingomyelinase-like phosphodiesterase.
  
     0.407
Lade_1110
Putative membrane protein YdgA-like protein.
  
     0.402
Your Current Organism:
Legionella adelaidensis
NCBI taxonomy Id: 45056
Other names: ATCC 49625, CCUG 31231 A, CIP 103645, DSM 19888, L. adelaidensis, NCTC 12735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.