STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lade_2148Putative periplasmic or secreted lipoprotein. (185 aa)    
Predicted Functional Partners:
yraO
DnaA initiator-associating factor for replication initiation.
  
    0.834
osmY_2
Hemolysin, lipoprotein.
 
    
0.819
Lade_2146
Hypothetical protein; Belongs to the UPF0102 family.
       0.756
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
  
     0.600
sdhC
Succinate dehydrogenase cytochrome b556 subunit C.
  
     0.571
atpB
ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
 
     0.538
yjbJ
Stress response protein; Belongs to the UPF0337 (CsbD) family.
  
    0.485
parB_2
Chromosome partitioning protein parB; Belongs to the ParB family.
       0.480
parA
Chromosome partitioning protein ParA.
       0.463
atpI
ATP synthase protein I.
       0.425
Your Current Organism:
Legionella adelaidensis
NCBI taxonomy Id: 45056
Other names: ATCC 49625, CCUG 31231 A, CIP 103645, DSM 19888, L. adelaidensis, NCTC 12735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.