STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgee_00763-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family. (173 aa)    
Predicted Functional Partners:
xth
Hypothetical protein.
    
 0.637
xth-2
Hypothetical protein.
    
 0.637
Lgee_0077
Integral membrane protein (PIN domain superfamily).
       0.532
Lgee_0075
Ankyrin repeat protein.
       0.480
Lgee_0934
Putative membrane-associated phospholipid phosphatase.
  
  
 0.416
Lgee_2057
Hypothetical protein; C-terminal part of DNA polymerase, bacteriophage-type.
 
   
 0.401
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.