Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgee_0118Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family. (410 aa)    
Predicted Functional Partners:
Lgee_1630
Putative nucleoside-diphosphate sugar epimerase.
 
  
 0.889
pglC
Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase.
  
 0.858
Lgee_0120
Glycosyltransferase, group 1 family.
 
  
 0.816
Lgee_1732
Peptide synthetase, non-ribosomal.
  
 
 0.769
iolG_1
Myo-inositol-2-dehydrogenase.
  
  
 0.758
capL
Protein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.628
Lgee_0126
Chloramphenicol acetyltransferase.
 
   0.621
Lgee_0935
Glycosyl transferase, group 2 family protein.
  
  
 0.600
Lgee_0123
Chloramphenicol acetyltransferase.
  
  
 0.582
wecB
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.582
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.