Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_0122LPS O-antigen length regulator. (450 aa)    
Predicted Functional Partners:
pglC
Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase.
  
  
 0.592
hepC_2
Heparin-sulfate lyase precursor.
       0.586
wecB
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.586
Lgee_0120
Glycosyltransferase, group 1 family.
  
  
 0.559
capL
Protein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.531
wecC
UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.531
Lgee_0118
Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.516
Lgee_0123
Chloramphenicol acetyltransferase.
  
    0.490
Lgee_0124
Hypothetical protein.
  
  
 0.477
Lgee_0125
Hypothetical protein.
       0.437
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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