Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_0126Chloramphenicol acetyltransferase. (228 aa)    
Predicted Functional Partners:
pglC
Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase.
    0.951
lpxA
UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
 
 0.781
Lgee_2269
Outer membrane protein OmpH; Belongs to the skp family.
  
    0.751
Lgee_0124
Hypothetical protein.
 
   
 0.733
Lgee_0125
Hypothetical protein.
       0.723
Lgee_0123
Chloramphenicol acetyltransferase.
       0.722
Lgee_2122
Acetyltransferase.
   
 
 0.639
Lgee_0118
Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family.
 
   0.621
coq7
Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
       0.618
bamA
Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
  
 0.612
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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