STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgee_0147Antirestriction protein. (168 aa)    
Predicted Functional Partners:
ssb
Single strand DNA binding protein.
       0.776
Lgee_0149
Hypothetical protein.
       0.694
Lgee_1825
Hypothetical protein.
  
     0.538
Lgee_0186
TraU protein.
  
     0.533
Lgee_0184
Membrane protein.
  
     0.522
Lgee_2169
Transporter family transporter protein.
  
     0.511
Lgee_0154
Putative integrase.
  
     0.488
Lgee_0185
Tfp pilus assembly, pilus retraction ATPase PilT.
  
     0.473
Lgee_0198
Bile acid beta-glucosidase.
  
     0.463
Lgee_2015
Type II/III secretion system protein.
  
     0.461
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.