Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Lgee_0409Tryptophan-rich sensory protein. (159 aa)    
Predicted Functional Partners:
Lgee_0410
Deoxyribodipyrimidine photolyase-related protein.
       0.800
Lgee_0408
Rolling pebbles isoform 7.
  
    0.737
Lgee_0938
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
  
 0.579
Lgee_1785
Deoxyribodipyrimidine photolyase.
 
  
 0.547
Lgee_1784
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
  
 0.538
crtI
Phytoene desaturase (lycopene-forming).
 
  
 0.505
atpH
ATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
   0.466
Lgee_0406
Hypothetical protein.
       0.451
Lgee_0407
Hypothetical protein.
       0.451
Lgee_0831
Sensory box histidine kinase/response regulator.
     
 0.419
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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