Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Dcm | metK | Lgee_1162 | Lgee_1415 | DNA (cytosine-5-)-methyltransferase. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.932 |
| Dcm | mtnN | Lgee_1162 | Lgee_0413 | DNA (cytosine-5-)-methyltransferase. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. | 0.906 |
| Dcm | sahH_1 | Lgee_1162 | Lgee_1414 | DNA (cytosine-5-)-methyltransferase. | S-adenosyl-L-homocysteine hydrolase. | 0.921 |
| Lgee_1036 | metK | Lgee_1036 | Lgee_1415 | Flagellar protein. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.596 |
| Lgee_1036 | mtnN | Lgee_1036 | Lgee_0413 | Flagellar protein. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. | 0.594 |
| Lgee_1732 | guaA | Lgee_1732 | Lgee_1060 | Peptide synthetase, non-ribosomal. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.612 |
| Lgee_1732 | metC | Lgee_1732 | Lgee_1828 | Peptide synthetase, non-ribosomal. | Cystathionine beta-lyase. | 0.477 |
| Lgee_1732 | metG | Lgee_1732 | Lgee_1954 | Peptide synthetase, non-ribosomal. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.538 |
| Lgee_1732 | mtnN | Lgee_1732 | Lgee_0413 | Peptide synthetase, non-ribosomal. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. | 0.512 |
| Lgee_1732 | nadE | Lgee_1732 | Lgee_0841 | Peptide synthetase, non-ribosomal. | Glutamine dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.539 |
| guaA | Lgee_1732 | Lgee_1060 | Lgee_1732 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Peptide synthetase, non-ribosomal. | 0.612 |
| guaA | metC | Lgee_1060 | Lgee_1828 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Cystathionine beta-lyase. | 0.485 |
| guaA | metG | Lgee_1060 | Lgee_1954 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.895 |
| guaA | metK | Lgee_1060 | Lgee_1415 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.866 |
| guaA | mtnN | Lgee_1060 | Lgee_0413 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. | 0.516 |
| guaA | nadE | Lgee_1060 | Lgee_0841 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Glutamine dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.560 |
| metC | Lgee_1732 | Lgee_1828 | Lgee_1732 | Cystathionine beta-lyase. | Peptide synthetase, non-ribosomal. | 0.477 |
| metC | guaA | Lgee_1828 | Lgee_1060 | Cystathionine beta-lyase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.485 |
| metC | metG | Lgee_1828 | Lgee_1954 | Cystathionine beta-lyase. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.941 |
| metC | metK | Lgee_1828 | Lgee_1415 | Cystathionine beta-lyase. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.465 |
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