Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgee_0430Signal peptide protein. (101 aa)    
Predicted Functional Partners:
Lgee_0432
Hypothetical protein; Belongs to the UPF0276 family.
 
  
 0.995
Lgee_0431
Hypothetical protein.
 
  
 0.991
Lgee_0433
Silver efflux pump.
 
   
 0.870
yceI
Polyprenyl-pyrophosphate binding protein; Belongs to the UPF0312 family.
       0.863
dotG
IcmE/DotG protein.
   
    0.821
cybA
Cytochrome b561 transmembrane protein.
       0.800
Lgee_0427
Putative YceI-like family protein; Belongs to the UPF0312 family.
       0.777
Lgee_2241
YHS domain protein.
 
    0.550
Lgee_0644
Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
  
 0.544
Lgee_0187
Conserved protein of unknown function.
   
    0.541
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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