Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lgee_0460HTH-type transcriptional regulator. (196 aa)    
Predicted Functional Partners:
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.960
Lgee_1259
IcmT protein.
  
     0.757
dotC
Defect in organelle trafficking lipoprotein DotC.
 
  
 0.756
Lgee_0461
Methyltransferase.
 
     0.750
Lgee_1011
Protein IcmO (DotL).
 
     0.747
Lgee_1845
Protein IcmL (DotI).
  
     0.730
umuC
DNA polymerase V, subunit C.
  
 
 0.722
Lgee_1838
Protein IcmB (DotO).
 
     0.712
enhA_2
Enhanced entry protein EnhA.
 
     0.709
enhA_4
Enhanced entry protein EnhA.
 
     0.679
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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