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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgee_0481Recombinase B. (839 aa)    
Predicted Functional Partners:
Lgee_1044
ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
 
 
 0.998
Lgee_1838
Protein IcmB (DotO).
  
     0.543
Lgee_0480
Hypothetical protein.
       0.536
Lgee_0482
Hypothetical protein.
       0.536
Lgee_1903
Coiled-coil protein.
  
     0.431
Lgee_1211
IcmL-like protein.
  
     0.423
Lgee_1011
Protein IcmO (DotL).
  
     0.404
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.