Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_0481Recombinase B. (839 aa)    
Predicted Functional Partners:
Lgee_1044
ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
 
 
 0.997
Lgee_1838
Protein IcmB (DotO).
  
     0.543
Lgee_0480
Hypothetical protein.
       0.536
Lgee_0482
Hypothetical protein.
       0.534
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
    0.505
Lgee_0412
Nucleoside-diphosphate sugar epimerase.
       0.504
nadE
Glutamine dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.504
recJ
Single-stranded-DNA-specific exonuclease RecJ.
     
 0.456
Lgee_0630
Potassium efflux system KefA.
  
  
 0.431
Lgee_1903
Coiled-coil protein.
  
     0.431
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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