Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgee_0499 | Lgee_0504 | Lgee_0499 | Lgee_0504 | Conjugal transfer protein TrbH. | Transglycosylase SLT domain protein. | 0.621 |
Lgee_0499 | topA_2 | Lgee_0499 | Lgee_0507 | Conjugal transfer protein TrbH. | DNA topoisomerase I. | 0.584 |
Lgee_0499 | traC_2 | Lgee_0499 | Lgee_0509 | Conjugal transfer protein TrbH. | DNA primase TraC. | 0.657 |
Lgee_0499 | traF_2 | Lgee_0499 | Lgee_0506 | Conjugal transfer protein TrbH. | Conjugal transfer peptidase TraF. | 0.609 |
Lgee_0499 | traG_2 | Lgee_0499 | Lgee_0505 | Conjugal transfer protein TrbH. | Conjugal transfer coupling protein TraG. | 0.609 |
Lgee_0499 | trbG_2 | Lgee_0499 | Lgee_0498 | Conjugal transfer protein TrbH. | Conjugal transfer protein trbG precursor. | 0.782 |
Lgee_0499 | trbI_2 | Lgee_0499 | Lgee_0500 | Conjugal transfer protein TrbH. | Conjugal transfer protein trbI. | 0.787 |
Lgee_0499 | trbJ_2 | Lgee_0499 | Lgee_0501 | Conjugal transfer protein TrbH. | Conjugal transfer protein TrbJ. | 0.787 |
Lgee_0499 | trbK | Lgee_0499 | Lgee_0502 | Conjugal transfer protein TrbH. | Hypothetical protein. | 0.712 |
Lgee_0499 | trbL_2 | Lgee_0499 | Lgee_0503 | Conjugal transfer protein TrbH. | Conjugal transfer protein trbL. | 0.619 |
Lgee_0504 | Lgee_0499 | Lgee_0504 | Lgee_0499 | Transglycosylase SLT domain protein. | Conjugal transfer protein TrbH. | 0.621 |
Lgee_0504 | topA_2 | Lgee_0504 | Lgee_0507 | Transglycosylase SLT domain protein. | DNA topoisomerase I. | 0.795 |
Lgee_0504 | traC_2 | Lgee_0504 | Lgee_0509 | Transglycosylase SLT domain protein. | DNA primase TraC. | 0.896 |
Lgee_0504 | traF_2 | Lgee_0504 | Lgee_0506 | Transglycosylase SLT domain protein. | Conjugal transfer peptidase TraF. | 0.897 |
Lgee_0504 | traG_2 | Lgee_0504 | Lgee_0505 | Transglycosylase SLT domain protein. | Conjugal transfer coupling protein TraG. | 0.899 |
Lgee_0504 | trbG_2 | Lgee_0504 | Lgee_0498 | Transglycosylase SLT domain protein. | Conjugal transfer protein trbG precursor. | 0.846 |
Lgee_0504 | trbI_2 | Lgee_0504 | Lgee_0500 | Transglycosylase SLT domain protein. | Conjugal transfer protein trbI. | 0.846 |
Lgee_0504 | trbJ_2 | Lgee_0504 | Lgee_0501 | Transglycosylase SLT domain protein. | Conjugal transfer protein TrbJ. | 0.633 |
Lgee_0504 | trbK | Lgee_0504 | Lgee_0502 | Transglycosylase SLT domain protein. | Hypothetical protein. | 0.649 |
Lgee_0504 | trbL_2 | Lgee_0504 | Lgee_0503 | Transglycosylase SLT domain protein. | Conjugal transfer protein trbL. | 0.900 |
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