Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgee_0179 | Lgee_0278 | Lgee_0179 | Lgee_0278 | Phosphotransferase enzyme family protein. | Hypothetical protein. | 0.542 |
Lgee_0179 | Lgee_0444 | Lgee_0179 | Lgee_0444 | Phosphotransferase enzyme family protein. | Putative lipase. | 0.446 |
Lgee_0179 | Lgee_0514 | Lgee_0179 | Lgee_0514 | Phosphotransferase enzyme family protein. | Phosphotransferase enzyme family protein. | 0.664 |
Lgee_0179 | Lgee_1150 | Lgee_0179 | Lgee_1150 | Phosphotransferase enzyme family protein. | Tyrosine phosphatase II superfamily transporter protein. | 0.529 |
Lgee_0179 | Lgee_1981 | Lgee_0179 | Lgee_1981 | Phosphotransferase enzyme family protein. | Protein phosphatase 2C. | 0.489 |
Lgee_0179 | aatA_1 | Lgee_0179 | Lgee_0830 | Phosphotransferase enzyme family protein. | Aspartate aminotransferase A. | 0.467 |
Lgee_0179 | bcp | Lgee_0179 | Lgee_0944 | Phosphotransferase enzyme family protein. | Acetylpolyamine aminohydrolase. | 0.624 |
Lgee_0179 | legA | Lgee_0179 | Lgee_0613 | Phosphotransferase enzyme family protein. | Ankyrin-repeat containing protein, substrate of the Dot/Icm secretion system. | 0.615 |
Lgee_0179 | rssA | Lgee_0179 | Lgee_2058 | Phosphotransferase enzyme family protein. | Esterase of the alpha-beta hydrolase superfamily protein. | 0.418 |
Lgee_0278 | Lgee_0179 | Lgee_0278 | Lgee_0179 | Hypothetical protein. | Phosphotransferase enzyme family protein. | 0.542 |
Lgee_0278 | Lgee_0444 | Lgee_0278 | Lgee_0444 | Hypothetical protein. | Putative lipase. | 0.644 |
Lgee_0278 | Lgee_0514 | Lgee_0278 | Lgee_0514 | Hypothetical protein. | Phosphotransferase enzyme family protein. | 0.621 |
Lgee_0278 | Lgee_1150 | Lgee_0278 | Lgee_1150 | Hypothetical protein. | Tyrosine phosphatase II superfamily transporter protein. | 0.623 |
Lgee_0278 | Lgee_1981 | Lgee_0278 | Lgee_1981 | Hypothetical protein. | Protein phosphatase 2C. | 0.572 |
Lgee_0278 | aatA_1 | Lgee_0278 | Lgee_0830 | Hypothetical protein. | Aspartate aminotransferase A. | 0.522 |
Lgee_0278 | bcp | Lgee_0278 | Lgee_0944 | Hypothetical protein. | Acetylpolyamine aminohydrolase. | 0.733 |
Lgee_0278 | legA | Lgee_0278 | Lgee_0613 | Hypothetical protein. | Ankyrin-repeat containing protein, substrate of the Dot/Icm secretion system. | 0.731 |
Lgee_0278 | rssA | Lgee_0278 | Lgee_2058 | Hypothetical protein. | Esterase of the alpha-beta hydrolase superfamily protein. | 0.486 |
Lgee_0444 | Lgee_0179 | Lgee_0444 | Lgee_0179 | Putative lipase. | Phosphotransferase enzyme family protein. | 0.446 |
Lgee_0444 | Lgee_0278 | Lgee_0444 | Lgee_0278 | Putative lipase. | Hypothetical protein. | 0.644 |
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