Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_0517Chloramphenicol acetyltransferase. (210 aa)    
Predicted Functional Partners:
Lgee_0516
Methyltransferase.
       0.776
Lgee_0518
GNAT family acetyltransferase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
aroK-4
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.773
Lgee_1732
Peptide synthetase, non-ribosomal.
     
 0.687
Lgee_0520
Acetyltransferase (GNAT) family protein.
       0.574
Lgee_0521
ATPase.
       0.574
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.473
pglC
Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase.
  
  
 0.472
Lgee_0118
Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.450
Lgee_2084
Polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.450
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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