Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_0672Signal transduction histidine kinase. (555 aa)    
Predicted Functional Partners:
Lgee_0673
Guanylate/adenylate cyclase.
 
 
 
 0.967
Lgee_1507
Sensory box histidine kinase/response regulator.
 
 
 0.950
Lgee_1733
Sensory box histidine kinase/response regulator.
 
 
 0.924
Lgee_0024
Sensory box histidine kinase/response regulator.
 
 
 0.923
Lgee_0831
Sensory box histidine kinase/response regulator.
 
 
 0.873
gacS/letS
Transmission sensor LetS.
 
 
 0.866
Lgee_0709
Regulatory protein (GGDEF and EAL domains).
 
 
 
 0.848
flgD_1
Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.797
flgD_2
Flagellar basal body rod modification protein.
   
    0.797
Lgee_0418
Sensory box sensor histidine kinase/response regulator.
 
 
 0.707
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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