Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lysSaccharopine dehydrogenase. (358 aa)    
Predicted Functional Partners:
Lgee_0715
Hypothetical protein.
       0.697
cpo
Chloroperoxidase.
 
     0.654
cysC
Putative adenylyl-sulfate kinase.
       0.601
Lgee_0716
Beta-phosphoglucomutase.
       0.513
Lgee_2022
Flavin containing monooxygenae.
  
     0.470
Lgee_0278
Hypothetical protein.
  
     0.430
legA
Ankyrin-repeat containing protein, substrate of the Dot/Icm secretion system.
  
 
   0.426
ychF
GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
     
  0.404
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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