Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgee_0750 | Lgee_1036 | Lgee_0750 | Lgee_1036 | Flagellar GTP-binding protein FlhF. | Flagellar protein. | 0.961 |
Lgee_0750 | Lgee_1362 | Lgee_0750 | Lgee_1362 | Flagellar GTP-binding protein FlhF. | Flagellar biosynthesis MinD. | 0.998 |
Lgee_0750 | flgB | Lgee_0750 | Lgee_0754 | Flagellar GTP-binding protein FlhF. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.968 |
Lgee_0750 | flgC_1 | Lgee_0750 | Lgee_0755 | Flagellar GTP-binding protein FlhF. | Flagellar basal body rod protein FlgC. | 0.962 |
Lgee_0750 | flgG_1 | Lgee_0750 | Lgee_0759 | Flagellar GTP-binding protein FlhF. | Flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.964 |
Lgee_0750 | flgJ | Lgee_0750 | Lgee_0764 | Flagellar GTP-binding protein FlhF. | Muramidase, peptidoglycan hydrolase FlgJ. | 0.967 |
Lgee_0750 | flgK | Lgee_0750 | Lgee_0761 | Flagellar GTP-binding protein FlhF. | Flagellar hook-associated protein FlgK. | 0.970 |
Lgee_0750 | flhA_1 | Lgee_0750 | Lgee_0749 | Flagellar GTP-binding protein FlhF. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.973 |
Lgee_0750 | fliE | Lgee_0750 | Lgee_1028 | Flagellar GTP-binding protein FlhF. | Flagellar hook-basal body complex protein. | 0.958 |
Lgee_0750 | fliG | Lgee_0750 | Lgee_1026 | Flagellar GTP-binding protein FlhF. | Flagellar motor switch protein. | 0.985 |
Lgee_1036 | Lgee_0750 | Lgee_1036 | Lgee_0750 | Flagellar protein. | Flagellar GTP-binding protein FlhF. | 0.961 |
Lgee_1036 | Lgee_1362 | Lgee_1036 | Lgee_1362 | Flagellar protein. | Flagellar biosynthesis MinD. | 0.879 |
Lgee_1036 | flgB | Lgee_1036 | Lgee_0754 | Flagellar protein. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.976 |
Lgee_1036 | flgC_1 | Lgee_1036 | Lgee_0755 | Flagellar protein. | Flagellar basal body rod protein FlgC. | 0.914 |
Lgee_1036 | flgG_1 | Lgee_1036 | Lgee_0759 | Flagellar protein. | Flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.954 |
Lgee_1036 | flgJ | Lgee_1036 | Lgee_0764 | Flagellar protein. | Muramidase, peptidoglycan hydrolase FlgJ. | 0.993 |
Lgee_1036 | flgK | Lgee_1036 | Lgee_0761 | Flagellar protein. | Flagellar hook-associated protein FlgK. | 0.968 |
Lgee_1036 | flhA_1 | Lgee_1036 | Lgee_0749 | Flagellar protein. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.896 |
Lgee_1036 | fliE | Lgee_1036 | Lgee_1028 | Flagellar protein. | Flagellar hook-basal body complex protein. | 0.955 |
Lgee_1036 | fliG | Lgee_1036 | Lgee_1026 | Flagellar protein. | Flagellar motor switch protein. | 0.999 |
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