Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgee_0827AraC family transcriptional regulator. (282 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.820
Lgee_0831
Sensory box histidine kinase/response regulator.
 
   
 0.655
Lgee_1732
Peptide synthetase, non-ribosomal.
  
  
 0.639
Lgee_0709
Regulatory protein (GGDEF and EAL domains).
  
  
 0.633
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.629
Lgee_2122
Acetyltransferase.
 
   
 0.604
Lgee_0828
Lipase.
     
 0.603
Lgee_1733
Sensory box histidine kinase/response regulator.
     
 0.600
Lgee_2227
Phosphotransferase enzyme family protein.
 
     0.591
Lgee_0024
Sensory box histidine kinase/response regulator.
  
  
 0.587
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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