Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
kanEAlpha-D-kanosaminyltransferase. (467 aa)    
Predicted Functional Partners:
pglC
Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase.
 
  
 0.674
Lgee_2084
Polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.596
wecC
UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.581
capL
Protein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.575
ugd
UDP-glucose 6-dehydrogenase.
 
  
 0.573
Lgee_1630
Putative nucleoside-diphosphate sugar epimerase.
  
  
 0.545
Lgee_0118
Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.539
Lgee_0914
Hypothetical protein.
       0.530
Lgee_1603
Glycosyltransferase, group 1 family.
 
  
 0.512
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.509
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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