STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgee_0933Dolichyl-phosphate-mannose-protein mannosyltransferase. (537 aa)    
Predicted Functional Partners:
Lgee_0935
Glycosyl transferase, group 2 family protein.
 
  
 0.994
Lgee_0936
lipid-A-disaccharide synthase.
 
     0.913
Lgee_0934
Putative membrane-associated phospholipid phosphatase.
 
  
 0.904
Lgee_0932
Transmembrane protein.
  
    0.766
pdxB
Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
     
 0.763
Lgee_1425
Cell wall biosynthesis glycosyltransferase.
 
  
 0.603
Lgee_2084
Polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.557
Lgee_1732
Peptide synthetase, non-ribosomal.
  
  
 0.525
Lgee_0118
Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.488
ugd
UDP-glucose 6-dehydrogenase.
  
  
 0.446
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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