Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
Lgee_0938Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family. (462 aa)    
Predicted Functional Partners:
Lgee_0937
Glycosyl transferase.
       0.773
Lgee_0409
Tryptophan-rich sensory protein.
 
  
 0.579
Lgee_2122
Acetyltransferase.
  
   0.555
ugd
UDP-glucose 6-dehydrogenase.
       0.493
galU
Glucose-1-phosphate uridylyltransferase.
       0.493
etfB
Electron transfer flavoprotein subunit beta.
       0.493
etfA
Electron transfer flavoprotein subunit alpha.
       0.478
ald
Alanine dehydrogenase; Belongs to the AlaDH/PNT family.
       0.466
Lgee_2075
3-oxo-5-alpha-steroid 4-dehydrogenase.
 
     0.427
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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