Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
legL7_2Leucine-rich repeat-containing protein. (254 aa)    
Predicted Functional Partners:
legL1
Gala protein type 1, 3 or 4.
  
     0.764
Lgee_1234
Leucine Rich repeats (2 copies).
  
     0.764
Lgee_1142
Adenosine deaminase.
  
     0.712
Lgee_2235
U-box domain protein.
  
     0.708
Lgee_0097
Serine/threonine-protein kinase.
  
     0.629
Lgee_1233
Leucine Rich repeats (2 copies).
  
     0.625
Lgee_0533
Leucine Rich repeats (2 copies).
  
     0.589
Lgee_1526
Leucine Rich repeats (2 copies).
  
     0.528
Lgee_1394
Zip family transporter.
  
     0.502
Lgee_1420
Hypothetical protein; Belongs to the UPF0235 family.
  
     0.414
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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