Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fliQ_1Flagellar biosynthetic protein FliQ. (89 aa)    
Predicted Functional Partners:
Lgee_1020
Flagellar biosynthetic protein FlhB.
 
 
 0.997
fliR_1
Flagellar biosynthetic protein fliR.
 
 
 0.997
fliG
Flagellar motor switch protein.
 
 
 0.995
fliF_1
Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.994
fliE
Flagellar hook-basal body complex protein.
 
 
 0.990
fliP_1
Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
 
 0.990
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.984
fliR_2
Flagellar biosynthetic protein fliR.
 
 
 0.983
flgC_1
Flagellar basal body rod protein FlgC.
 
 
 0.979
flgE_1
Flagellar hook protein FlgE.
 
 
 0.979
Your Current Organism:
Legionella geestiana
NCBI taxonomy Id: 45065
Other names: ATCC 49504, CCUG 44893, CIP 105569, DSM 21217, L. geestiana, NCTC 12373
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